Gaussian 16 Linux < AUTHENTIC · FIX >
By following this comprehensive guide, you are now well-equipped to tackle your computational chemistry projects with confidence and efficiency.
Each user who runs Gaussian must have their environment configured to point to the software and the scratch directory. Add the following lines to your shell configuration file ( ~/.bashrc for bash users):
cd $PBS_O_WORKDIR module load Gaussian/g16.C02_pgi export GAUSS_SCRDIR=/path/to/scratch
: Designed for headless operation via the terminal, allowing users to submit jobs through bash scripts or queueing systems like SLURM. Automation & Workflow Enhancements gaussian 16 linux
export g16root=/share/home/kanghao/soft export GAUSS_SCRDIR=/share/home/kanghao/soft/g16/scratch source $g16root/g16/bsd/g16.profile
: To keep a job running after closing the terminal, add an ampersand: g16 < input.com > output.log & Matter Modeling Stack Exchange Setting Up the Linux Environment
Gaussian 16 on Linux provides a robust platform for modern quantum chemistry. By properly configuring memory, processors, and utilizing fast local scratch space, users can drastically reduce simulation times. Proper management of Linux permissions and batch scripts ensures stable performance in both workstation and cluster environments. By following this comprehensive guide, you are now
Gaussian will read from test.gjf and write the output to test.log .
This writes the first 20 GB to /scratch1/loc1 and overflows the remainder into /scratch2/loc2 . Running Your First Job
Test job for H2O
Once installed, you can run jobs in the foreground or as background processes. Foreground g16 input.com output.log Use code with caution. Background (Using nohup) nohup g16 input.com output.log & Use code with caution. Using SLURM Batch Script For cluster environments, create a job.sh file:
. A simple input file includes the link 0 commands (memory and processors), the functional/basis set (like B3LYP/6-31G(d) ), and the molecular coordinates. To run a job from the terminal, use: g16 < input.com > output.log & Use code with caution. Copied to clipboard